Why would you need to format them in FAT32 and not NTFS. The Windows version of FAT32 formatter is clipped in that you can only format a max of 32G drive.
In theory, this should support a total of approximately 268,435,456 (228) clusters, allowing for drive sizes in the range of 8 terabytes with 32K clusters (wiki).
I believe third party FAT32 formatters are around that lets you exceed the artificial Windows limit.
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